Date |
Topic |
Reading |
Slides and Exercises
|
08/25/2014 |
Introduction to Computational Science |
|
Intro to CPS |
08/27/2014 |
MIcroprocessors |
Eijkhout pp. 11-21
|
Slides (slides 1-13)
Microprocessor Architecture Questions
|
09/03/2014 |
Memory Hierarchy |
Eijkhout pp. 21-36 |
Slides (slides 14-45)
Memory Hierarchy slides
|
09/08/2014 |
Multicore and the Roofline Model
|
Eijkhout pp. 36-47
Roofline model paper
|
Roofline model slides
Roofline model exercises
|
09/10/2014 |
Locality and Programming for Performance |
Eijkhout pp. 47-64 |
Exercises
|
09/15/2014 |
Programming for Performance (cont.)
|
|
|
09/17/2014 |
Introduction to C (taught by Henry Moncada)
|
Practical Programming in C at MIT
|
C Code Examples
|
09/22/2014 |
C and Performance
|
GNU gcc compiler optimization
Cache blocking for matrix algorithms
|
|
09/24/2014 |
Introduction to Fortran
|
Fortran90 Tutorial at MTU
Fortran90 Tutorial at Rice University
|
Fortran Intro slides
|
09/29/2014 |
Fortran90 in More Detail
|
Fortran90 Tutorial at MTU
Arrays
Modules
External Subprograms and Interface Blocks
|
|
10/01/2014 |
Introduction to Python |
Python videos at Software Carpentry
|
|
10/06/2014 |
NumPy and SciPy
Python Scripting as glue
|
SciPy.org |
Slides (PDF)
Slides (PPTX)
|
10/08/2014 |
Python Scripting (cont.) |
|
Handout
|
10/13/2014 |
Introduction to Parallel Computing |
|
Slides (PDF)
Slides (PPTX)
|
10/15/2014 |
Introduction to OpenMP (taught by Rogelio Long) |
|
Slides (PPTX)
Example codes:
omp_hello.c
omp_private.c
omp_lastprivate.c
omp_reduction.c
omp_section.c
omp_nested.c
|
10/20/2014 |
Introduction to MPI |
Introduction to MPI at
www.citutor.org sections 1, 2, 3
|
Exercises 1.5, 1.6, 2.8, 2.9
|
10/22/2014 |
MPI Point-to-Point Communication and Derived Datatypes |
Introduction to MPI at www.citutor.org sections 4, 5 (omit 5.4.2, 5.4.3, 5.4.5) |
Exercises 4.8, 5.5
|
10/27/2014 |
Group work on Lab 3
|
|
|
10/29/2014 |
MPI Collective Communication and Topologies |
Introduction to MPI at www.citutor.org sections 6, 7, 8 |
|
11/03/2014 |
Parallel Matrix Operations using MPI |
|
Slides (PDF)
Slides (PPT)
|
11/05/2014 |
Cartesian Topologies
Cannon's Matrix Multiplication Algorithm
|
|
|
11/10/2014 |
UTEP Research Cloud
Batch Queuing Systems
|
|
|
11/12/2014 |
Speedup and Scalability |
Eijkhout 2.7.3 and 2.7.4 (online version) |
Slides (PDF)
Slides (PPTX)
|
11/17/2014 |
Review |
|
Review guide |
11/19/2014 |
Midterm Exam |
|
|
11/24/2014 |
Computer Arithmetic
Numerical Linear Algebra
Dense Linear Algebra Libraries
|
Eijkhout
Numerical Computing with MATLAB
|
Computer Aritmetic slides
Numerical Linear Algebra slides
Dense Linear Algebra Libraries slides
|
11/26/2014 |
Using LAPACK |
LAPACK exercises |
|
12/01/2014 |
Numerical Sparse Linear Algebra |
Eijkhout
Conjugate Gradients without the Agonizing Pain by Jonathan Skewchuk
|
sparse slides
Direct and Iterative methods
PETSc tutorial
|
12/03/2014 |
Review for Final |
|
Test 1 Answers
Additional Practice Problems (PDF)
(Word version)
|
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